Jay T. Flatley
Analyst · JPMorgan
Thanks, Marc. We are very pleased with our second quarter results. The positive trends that began after Q3 2011 have continued through first half of 2012. We had sequential revenue and EPS growth with record operating margins, and we believe we positioned the company well in light of the macro uncertainty expected in the second half the year. While there's no clarity on sequestration and the NIH budget for 2013 remains uncertain, we continue to believe that the worst case 8% funding reduction is an unlikely scenario. The Obama administration has proposed a flat NIH budget for 2013, while last month, the Senate Appropriations Committee approved $100 million increase to the NIH budget for next year. More recently, the House Committee on Appropriations released their fiscal year 2013 Labor, Health and Human Services Funding Bill, which proposed roughly flat NIH funding year-over-year. While these are all positive indicators, we don't expect any budget clarity until a few months after the election. We also believe that our U.S. academic customers are better prepared than last year for budget challenges and are planning accordingly. In light of that, it's our view that the overall funding dynamics this year are considerably more favorable than last year, and we've considered a range of potential budget outcomes in formulating our annual guidance. We remind investors that in Q1 2012, our core sequencing consumable revenue was for the first time ever greater than instrument revenue, and this continued in Q2. A greater mix of consumable to instrument revenue provides more inherent visibility on our business. To improve this visibility even further, as we discussed in our Q1 earnings call, we proactively worked with some of our customers to project their consumable demands for the rest of the calendar year. By agreeing upfront to take periodic noncancelable, consumable shipments, these customers avoided our Q2 price increase. Tremendous growth in our sample prep products also improves this visibility given their highly recurring use and our customers' workflow. We're also seeing a continuing evolution of our customer mix toward more commercial, clinical and applied accounts reducing our exposure to academic funding. To further enhance our portfolio and product diversity, we announced a number of new offerings during the quarter, including Nextera XT DNA Sample Prep kits, the BaseSpace Apps store, the iSAAC genome alignment tool and a RapidTrack Whole Genome Sequencing Service. Additionally, we have numerous products that will begin shipment in the near term including the HiSeq 2500, the associated HiSeq 2000 upgrades, enhanced MiSeq, a 2 by 250 base pair of MiSeq sequencing kit and lower throughput kit, NuPCR consumables and new sample prep products like Nextera Exome and Custom Arrangement kit. While our overall view in the second half of the year remains cautious, with improved forecast visibility, new products and services launches, the change in customer mix, improved customer planning and fewer funding dynamics at play, we believe that we're in considerably more favorable position this year relative to last year. Let me turn now to some specific results of the quarter. Shipments during the quarter to the Americas were healthy with U.S. shipments up 18%, Canadian shipments up 15% and Brazil shipments up over 100% year-over-year. Since opening an office in São Paulo in Q1 on 2011, Brazil has moved up to be a top 12 country as measured by x U.S. shipments. With regard to Europe, we've not seen a material change, and our business there remains stable overall. Shipments to Spain and Italy actually increased sequentially during the quarter. Shipments to Asia, while down sequentially, grew year-over-year and remain healthy. This sequential decrease was expected as Q1 is the end of the Japanese fiscal year. Notable strength was seen in China where shipments grew 50% year-over-year. In the array business, total microarray revenue was roughly flat sequentially. This quarter marked the second-highest number of Infinium samples ever shipped. We received orders for approximately 250,000 more Exome samples bringing total samples order to date to approximately 1.6 million, by far the highest number of samples for any content collection in the company's history. New unit orders for iScan and HiScan microarray instrumentation were the highest since Q2 2011. In addition, Q2 saw market sequential orders strength in our Omni express, as well as our Ag arrays, including Bovine LD, PorcineSNP60 and MaizeSNP50. Our CytoSNP array shipments had their second best quarter ever and remain on track for submission of our iScan with CytoSNP for FDA 510(k) approval later this year. Yesterday, we launched our real-time PCR reagent portfolio, including a novel probe-based chemistry for gene expression analysis that we call NuPCR. In addition to the NuPCR reagent, we announced qPCR DNA-binding assays for gene expression and qPCR High Resolution Melt assays for genotyping studies. These provide researchers with a trio of high-quality, budget-friendly options in the qPCR reagent market. This reagent portfolio will be sold through our worldwide distribution network. Availability of NuPCR in the United States will be announced in the near future. NuPCR is a novel probe-based technology that doesn't rely on exonuclease activity to generate signal. Instead, the catalytic activities inherent in the 3-part oligo probe resulting in higher sensitivity experiments and consistently detect targets earlier in the cycle count and competing real-time PCR probes and it reduced cost. This collection of new assays is compatible with any real-time PCR platform offering researchers a wider range of choices. Additionally, all the assays are custom-designed using DesignStudio, a personalized web-based design tool available to Illumina customers. This unique easy-to-use software delivers bioinformatically optimized assays, ensuring high PCR efficiencies and assays that work the first time without tedious trial and error optimization, while also enabling simplified multiplexing. Turning now to our sequencing business, total sequencing revenue in Q2 grew mid-single digits sequentially attributable primarily to growing sequencing consumables, as well as growing service revenue for maintenance contracts on our larger install base. Total sequencing consumable revenue grew over 35% compared to Q2 of last year. We had record HiSeq and MiSeq consumable shipments during the quarter, and the average flow-through on HiSeq again increased sequentially. TruSeq and Nextera sample prep revenue year to date has grown 57% year-over-year demonstrating our focus on back-integrating into sample prep. We expect continued growth here as researchers convert from homebrew methods. We continue to gain competitive market share. We launched new sample prep product and our install base grows. Average annualized consumable utilization of HiSeq increased to $338,000 in Q2 from $299,000 in Q1, and we have several reasons to feel confident that this level of utilization can continue as the effect of the consumable price increase announced in April should be more greatly reflected in future quarters. Additionally, in Q4, we will begin to see the impact of the rapid run mode of the HiSeq 2500, which yields greater revenue per genome, and we expect to see sample prep revenue continue to grow. During the quarter, we introduced the Nextera XT DNA sample prep kit, the easiest way for researchers to prepare and sequence low input small genomes, PCR amplicons and plasmids. Compared with MiSeq, Nextera XT provides the fastest timed result of any next-generation sequencing technology, enabling researchers to go from genomic DNA to analyze data in less than 8 hours. Nextera XT will also be available for HiSeq allowing up to 1,536 samples per HiSeq 2000 run and up to 384 samples per HiSeq 2500 in rapid run mode. Last week, we introduced Nextera Exome and custom enrichment kit, leveraging the speed of Nextera technology and supporting the industry's lowest DNA sample input requirements, the new kits enable researchers to quickly and economically perform a wide range of studies from small focused gene panels to full human exomes. It also enable researchers to study small samples while retaining sufficient material for future analysis and offer the ability to process large numbers of samples without investing in automation systems. Sequencing instrumentation revenue was down sequentially primarily as a result of reduced MiSeq shipments as the backlog of MiSeq orders from 2011 was mostly cleared in Q1. MiSeq ASPs were also down slightly during the quarter, largely a function of our continuing successful trade-in program. For the first time since the second half of 2010, HiSeq 2000 orders and shipments increased sequentially. ASPs of HiSeq 2000 shipped in Q2 also rose sequentially. Through Q2, approximately 75% of new HiSeq 2000 orders have included an upgrade package. And as we begin to ship the new HiSeq 2500s in early Q4, the promotional upgrade price for the install base of HiSeqs will end, rising in price from $50,000 to $125,000. With the shipment of the 2500, we will provide the ability for all HiSeq to stream data to BaseSpace removing the requirement for local IT and bioinformatic capability. We continue to be very pleased with the market penetration of MiSeq. Customer feedback continues to be very positive, and the independent researchers have demonstrated, in peer-reviewed publications, the superiority of MiSeq over other desktop sequencers with regard to data quality, ease-of-use and end-to-end workflow. We're also pleased with the success of our trade-in program with such orders doubling sequentially from Q1. During the quarter, customers placed record orders for both MiSeq instruments and consumables. And MiSeq consumable shipments grew almost 60% sequentially. The average annualized flow-through in Q2 on MiSeq was approximately $55,000. The upgraded version of MiSeq will begin shipping from our factories within the next 2 weeks and the field upgrade program is about to begin. Initial test upgrades have gone extremely well. One of our early access customers has seen runs with throughput of approximately 10g with the data quality our customers have come to expect. With the new 2 by 250 base pair kits available on MiSeq, we expect aggressively market against longer read desktop machines and convert those users to MiSeq. More than half the orders for MiSeq continue to come from non-academic customers. Finally, we remain on track to submit both the MiSeq platform and our own proprietary assay to the FDA for 510(k) approval before year end. In our FastTrack Services business, we had record orders in Q2 resulting from booking approximately 3500 genomes as well as a large microarray service contract. We expect our success in genome bookings to continue in Q3. During the quarter, we launched the RapidTrack Full Genome Sequencing Service, a new offering that will deliver a whole human genome in less than 2 weeks. This premium service offers the fastest sample to data turnaround time to any whole genome sequencing service available today. Currently, we expect this service to be interesting to those research groups that needs samples analyzed quickly, to meet project deadlines or to submit grants and proof of principle studies. We've received several orders testing our RUO process with an eye towards qualifying this service under CLIA before the end of the year. During the quarter, we introduced BaseSpace Apps, the dedicated application store for BaseSpace, our genomics cloud computing platform. Informatics solutions available through BaseSpace Apps will allow customers to leverage a growing community of academic, commercial and open-source tool providers for building applications around the Illumina data to dramatically simplify and accelerate genomic data analysis. Initially, 14 early-access vendors are developing apps for BaseSpace with more than 20 other vendors working to deploy in BaseSpace tune as a developer portal and API are released publicly later this quarter. This morning, we announced our BaseSpace pricing for both data storage and downstream analysis. This is a first in the NGS market where customers will have the opportunity to receive free data storage and analysis on all Illumina data and have the ability to augment their account with flexible storage and app purchases. Our demonstrated leadership in informatics enables us to provide effective solutions for those lacking informatics infrastructure or expertise and allows us to open a new market opportunity. This informatics ecosystem will greatly simplify data analysis during and after our researches data has been generated. The data is always accessible and secure no matter where the research is located, and the App Store offers a wide range of bioinformatic tools and application. By greatly simplifying the management analysis of data, researchers can focus on the main task: understanding the biology. We're also excited to announce a growing adoption of BaseSpace along our MiSeq users with a vast majority of MiSeq systems now connected to BaseSpace and roughly half of those actively uploading data, demonstrating that our architecture's resonating in the market. This fall, Illumina will hold a company-sponsored symposium that we're calling Understand Your Genome to explore the best practices for deploying next-generation sequencing in a clinical setting. Illumina plans to sequence and analyze the genomes of approximately 60 participants as a multi-step process to engage experts in the field around whole genome sequencing. The first day will feature presentations on clinical, laboratory, ethical, legal and social issues around WGS. The second day, participants will receive their genome data on an iPad and learn under the guidance of the medical geneticist how to analyze their results using their MyGenome app. Through this program and related efforts, we're laying the groundwork for routine clinical use of whole genome sequencing, clearly the wave of the future. In conclusion, we're very pleased with our execution in the first half of 2012, and we're excited about our product lineup for the remainder of the year. We sequential revenue in EPS growth and record operating margins resulting from our focus on strong operational execution and continuous innovation to maintain our technological lead. And we continue to believe that the overall sequencing market has enormous potential and that we have the technology, people and infrastructure to maintain our market leadership and capitalize on this unique opportunity. Thank you for your time. We'll now open the lines for questions.